Protein ZmMADS36
ZmMADS36 is a protein in the MADS family.
Information
TF Name: ZmMADS36
Species: Maize
TF Family: MADS
Gene Name(Synonym): MADS36
Uniprot ID: B8A0R1
Subgenome: 1

Protein ZmMADS36

ZmMADS36 is a protein in the MADS family.

Overview of domains present in v5 transcripts
PF00319PF01486
Zm00001eb154380_T005
Zm00001eb154380_T001
Zm00001eb154380_T002
Zm00001eb154380_T003
Zm00001eb154380_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d043589DAPseq no logo sequence fimo position
Zm00001d043589DAPseq no logo sequence fimo position
Zm00001d043589ChIPseq no logo sequence fimo position
Zm00001d043589PChIPseq no logo sequence fimo position

Interactions where ZmMADS36 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS36 is the target  
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There are 38 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb154380_T005 from maize genome v5

Amino Acid Sequence
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MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTYCQGPGREVRGRDAQQGLGRRSPGAARGAGEGGAD
VRAHGEGAAVHDGGRRGAVHGAVAGAAGAQPGGGRAQGALREGPQDRRRDRLPPEHYQRTPRGALRVVRQACSFSGLEQR
RGRWRVDPTKRRRRPGTQTGFQLTLAGLEARGWIEDYELLHCALSGYLPLHPVGYGLKWLLTKVVLHQTRLSLMLMC

MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTYCQGPGREVRGRDAQQGLGRRSPGAARGAGEGGAD
VRAHGEGAAVHDGGRRGAVHGAVAGAAGAQPGGGRAQGALREGPQDRRRDRLPPEHYQRTPRGALRVVRQACSFSGLEQR
RGRWRVDPTKRRRRPGTQTGFQLTLAGLEARGWIEDYELLHCALSGYLPLHPVGYGLKWLLTKVVLHQTRLSLMLMC

MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTYCQGPGREVRGRDAQQGLGRRSPGAARGAGEGGAD
VRAHGEGAAVHDGGRRGAVHGAVAGAAGAQPGGGRAQGALREGPQDRRRDRLPPEHYQRTPRGALRVVRQACSFSGLEQR
RGRWRVDPTKRRRRPGTQTGFQLTLAGLEARGWIEDYELLHCALSGYLPLHPVGYGLKWLLTKVVLHQTRLSLMLMC

MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTYCQGPGREVRGRDAQQGLGRRSPGAARGAGEGGAD
VRAHGEGAAVHDGGRRGAVHGAVAGAAGAQPGGGRAQGALREGPQDRRRDRLPPEHYQRTPRGALRVVRQACSFSGLEQR
RGRWRVDPTKRRRRPGTQTGFQLTLAGLEARGWIEDYELLHCALSGYLPLHPVGYGLKWLLTKVVLHQTRLSLMLMC

MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTYCQGPGREVRGRDAQQGLGRRSPGAARGAGEGGAD
VRAHGEGAAVHDGGRRGAVHGAVAGAAGAQPGGGRAQGALREGPQDRRRDRLPPEHYQRTPRGALRVVRQACSFSGLEQR
RGRWRVDPTKRRRRPGTQTGFQLTLAGLEARGWIEDYELLHCALSGYLPLHPVGYGLKWLLTKVVLHQTRLSLMLMC

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00319
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Nucleotide Sequence
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CGGTCCACTGTGCCCAGCCCTCGAC...

GRMZM2G079727_T01 from maize genome v3


Related TFome: pUT5750

Amino Acid Sequence
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MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKVWADVRQERRAELEKAERMC
ELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHEERYGLCDKNFLQIWPQLAH
SQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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CTCCTCCCCGTCGCGTCCAGCCAAG...

GRMZM2G079727_T02 from maize genome v3

Amino Acid Sequence
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MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKVWADVRQERRAELEKAERMC
ELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHEERYGLCDKLAHSQAWNNGG
EGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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AGACTATCATGTCTCGGTACTGCGT...

Zm00001d043589_T001 from maize genome v4

Amino Acid Sequence
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MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKVWADVRQERRAELEKAERMC
ELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHEERYGLCDKNFLQIWPQLAH
SQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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AGGCCATTCCTCATCCTCCTCCCCG...

Zm00001d043589_T002 from maize genome v4

Amino Acid Sequence
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MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKVWADVRQERRAELEKAERMC
ELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHEERYGLCDKSLKSVQNFLQI
WPQLAHSQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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AGGCCATTCCTCATCCTCCTCCCCG...

Zm00001d043589_T003 from maize genome v4

Amino Acid Sequence
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MSRYCVNEQSSTRPHPASAGSWHGSTPAGSSPSNLKQATTGKEQLGGGCCSAARLRVRDDDMGRGRSEIKRIENPTQRQS
TFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKVWADVRQERRAELEKAERMC
ELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHEERYGLCDKSLKSVQNFLQI
WPQLAHSQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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AGGCCATTCCTCATCCTCCTCCCCG...

Zm00001d043589_T004 from maize genome v4

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELEKAERMCELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVR
SEKDRKIGGEIDCLQNIIRGRHEERYGLCDKLAHSQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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AGCTCGGCGGGGGCTGCTGCAGCGC...

Zm00001d043589_T005 from maize genome v4

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTYVCKPGSPICTYFISR
TLSSTVLCFCFSLVFAPVSRTWSRGTRPRRTARSGPTFARSGARSWRRRSGCASSWRRSCGS

Nucleotide Sequence
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AGCTCGGCGGGGGCTGCTGCAGCGC...

Zm00001d043589_T006 from maize genome v4

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKV
WADVRQERRAELEKAERMCELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHE
ERYGLCDKLAHSQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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AGCTCGGCGGGGGCTGCTGCAGCGC...

Zm00001d043589_T007 from maize genome v4

Amino Acid Sequence
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MLMC

Nucleotide Sequence
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GGCGGGGGCTGCTGCAGCGCCGCGC...

Zm00001eb154380_T001 from maize genome v5

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKV
WADVRQERRAELEKAERMCELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHE
ERYGLCDKLAHSQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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CATCCTCCTCCCCGTCGCGTCCAGC...

Zm00001eb154380_T002 from maize genome v5

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKV
WADVRQERRAELEKAERMCELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHE
ERYGLCDKNFLQIWPQLAHSQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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CATCCTCCTCCCCGTCGCGTCCAGC...

Zm00001eb154380_T003 from maize genome v5

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKV
WADVRQERRAELEKAERMCELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHE
ERYGLCDKLAHSQAWNNGGEGGGSTPPSGGGGLELKLGFN

Nucleotide Sequence
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GATAAAAGGAGAGCAAGAGTAGAGT...

Zm00001eb154380_T004 from maize genome v5

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDVDLLLLLFSGSGKLYHYLSPTVPTVKDLVERYEAATHSKV
WADVRQERRAELEKAERMCELMEKELRFMTVDDGEQYTVPSLELLEHSLEAAVHRVRSEKDRKIGGEIDCLQNIIRGRHE
ERYGLCDKLAHSQAWNNGGEGGGSTPPSGGGGLELKLGAFLTRPSITDQLFAVPNQPT

Nucleotide Sequence
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CGGTCCACTGTGCCCAGCCCTCGAC...


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